Genetics - Part 3 - Human GeneticsIntroduction
Prenatal Diagnosis
Amniocentesis
Chorionic Villi SamplingChorionic villi sampling is a procedure in which a small amount of the placenta is removed. It is normally done during the 10th to 12th week but it can be done as early as the 5th week of pregnancy. Karyotype analysis can be performed on these cells immediately after sampling. Although Chorionic villi sampling can be performed earlier in the pregnancy than amniocentesis, the risk of inducing a spontaneous abortion is 1 to 2% higher than the background rate. KaryotypesKaryotypes are prepared using cells from amniocentesis, chorionic villi sampling, or white blood cells. Cells are photographed while dividing. cells are normally stained so that banding patterns appear on the chromosomes. The bands make it easier to identify the chromosomes. Banding patterns are not visible in the photograph below due to the staining technique.
Pictures of the chromosomes are cut out and arranged in pairs according to size and banding patterns. Karyotypes can be used to determine if there is an abnormality in chromosome number or structure. NondisjunctionNondisjunction occurs when chromosomes fail to "disjoin" during meiosis or mitosis.Meiosis Meiosis II and Mitosis
Aneuploidy
Incidence of Genetic AbnormalitiesMaternal Age
Spontaneous Abortion (Miscarriage)
Autosomal AbnormalitiesNine percent of spontaneous abortions are trisomy 13, 18, or 21; but 0.1% of newborns have these trisomies. Down SyndromeDown syndrome is trisomy 21. It is characterized by mental disability, an abnormal pattern of palm creases, a flat face, sparse, straight hair, and short stature. People with Down syndrome have a high risk of having cardiac anomalies, leukemia, cataracts, and digestive blockages. Life expectancy of Down syndrome individuals is 55 years. The gene responsible for Alzheimers is on chromosome 21. Downs are at increased risk for developing Alzheimers.
Trisomy 18 (Edward Syndrome)The incidence of Trisomy 18 is approximately 1 out of every 3000 live births. Trisomy 18 is associated with mental and physical handicaps, skull and facial abnormalities, defects in all organ systems, and poor muscle tone. Mean survival is 2 to 4 months. Less than 10% survive to 1 year; a few survive to their 20s or 30s. Trisomy 13 (Patau Syndrome)
PolyploidyPolyploidy is a condition in which there is more than 2 sets of chromosomes. Triploids (3N), tetraploids (4N), pentaploids (5N) etc. are polyploids. Polyploidy in Plants Polyploidy is a major evolutionary mechanism in plants. Approximately 47% of all flowering plants are polyploid. Some examples of polyploid plant species are corn, wheat, cotton, sugarcane, apples, bananas, watermelons, and many flowers. Polyploid plants are often more vigorous than the diploid parent species. Polyploid plants are fertile. Polyploidy in Humans Polyploids have defects in nearly all organs. Most die as embryos or fetuses. Occasionally an infant survives for a few days. Abnormalities of the Sex ChromosomesTurner Syndrome - XO
XXX - Triple-X Syndrome (also XXXX and XXXXX)
XXY - Klinefelter Syndrome (also XXXY)Males with two or more X chromosomes have Klinefelter Syndrome. The incidence of Klinefelter Syndrome is 1 in 1000 male births. Symptoms include reduced sexual maturity and secondary sexual characteristics, breast swelling (gynecomastia), and infertility. Klinefelter males are slow to learn and individuals with additional Xs (XXXY) may be mentally handicapped. XYY - Jacob SyndromeMost XYY males are normal and are unaware of an additional chromosome. XYY males tend to be tall and may have speech and reading problems. Other Chromosomal AbnormalitiesDeletionsDeletions are fragments of chromosomes that are missing. They are usually lethal when homozygous and cause abnormalities when heterozygous. Radiation, viruses, chemicals, and unequal crossing-over may cause them. Cri du Chat SyndromeCri du chat syndrome is due to a deletion of a portion of chromosome 5. Cri du chat individuals are mentally handicapped. "Cri du chat" is French for "cry of the cat". The infants cry sounds like a cat. DuplicationA chromosome segment that is repeated is called a duplication. It can be due to unequal crossing over which produces a deletion on one chromosome and a duplication on the other. Often, multiple copies of genes from duplication can mutate without harming the individual because they still have one good copy of the gene. This type of mutation may be a source of variation for species. For example, the gene for human globin has given rise to several different genes that produce similar types of proteins. The different globins produced by these genes have very similar amino acid sequences. An example of a family of genes that have been produced by duplication is the beta globin family. This family contains five functioning genes and a pseudogene.
All of these genes have similar amino acid sequences due to their evolution from the same ancestral gene. Some families of genes contain hundreds of genes. Repeated SequencesRepeated sequences are short segments of DNA that are repeated hundreds or thousands of times. For example: In the segment of DNA illustrated below, CCG is repeated several times.
The cause is unknown. Fragile X SyndromeThis is the second most common cause of mental disability (Down Syndrome is first). The characteristic long, narrow face becomes more pronounced with age. The symptoms of fragile-X syndrome appear to be caused by an abnormal number of repeats (CCG) on the X chromosome. Normal DNA has 6 - 50 copies of "CCG" at the locus in question. Carrier males have 50 - 230 copies. This is referred to as a premutation (pre-fragile-X). The full mutation involves more than 230 repeats of CCG. The chance of being affected increases in successive generations because extra copies of CCG are added during the gamete-formation process. Females are more likely to add repeats than males. At most, males pass on 230 repeats to their children but females pass on more than 230 repeats. Mental problems are more common if the fragile X is inherited from the mother. This is an example of genomic imprinting discussed in the previous chapter. Fragile-X is more common in males because males inherit their X chromosome from their mother. The repeats cause the X to have a thread-like portion. It is called a fragile site because it breaks if cultured under certain conditions in the laboratory. TranslocationChromosomes that break usually rejoin at the same place but sometimes the broken ends rejoin in different places. Translocation is the movement of a chromosome or part of a chromosome to another (nonhomologous) chromosome. InversionA segment of a chromosome may become turned around forming an inversion. This can cause altered gene activity, a loss of crossing-over, or a duplication/deletion if crossing-over does occur. PedigreesIt is often easy to visualize relationships within an extended family by using symbols to represent people and relationships. A family tree which uses these symbols is called a pedigree. A sample pedigree is below.
In a pedigree, squares represent males and circles represent females. Horizontal lines connecting a male and female represent mating. Vertical lines extending downward from a couple represent their children. Subsequent generations are therefore written underneath the parental generations and the oldest individuals are found at the top of the pedigree. If the purpose of a pedigree is to analyze the pattern of inheritance of a particular trait, it is customary to shade in the symbol of all individuals that possess this trait. In the pedigree above, the grandparents had two children, a son and a daughter. The son had the trait in question. One of his four children also had the trait. Autosomal RecessiveCharacteristics of autosomal recessive inheritanceIt often skips generations; children that have the trait can have parents that do not. Heterozygotes (carriers) do not have the trait. People with the trait have two copies of the genes. If both parents are have the trait, all offspring will. Males and females are affected equally. Inbreeding results in a greater-than-expected number of rare autosomal recessive phenotypes. Cystic FibrosisThick mucous forms in the digestive tract and lungs of people with CF. As a result, they have difficult breathing and are susceptible to lung infections. The median life expectancy for babies born with cystic fibrosis is 37 years. The gene that causes the disease is on chromosome 7. One particular mutation of this allele causes 70-75% of the cases. It is somewhat difficult to detect prenatally. Gene therapy may be a possibility in the future. The normal gene was inserted into cells in laboratory cultures.
Cystic fibrosis is the most common lethal genetic disease among Caucasians in the US. One in 25 is a carrier; one in 2500 is affected. Tay SachsA fatty substance builds up in the neurons (nerve cells) of people with Tay Sachs. This causes a gradual paralysis and loss of nervous function that leads to death by age 4 or 5. It is due to a single defective enzyme which normally digests the fatty material. Heterozygotes (Aa) are not affected and are resistant to tuberculosis. Prenatal diagnosis is available. It is a common genetic disease among the Jewish population in the US (central and eastern European descent). Up to 11% are carriers. It is also common in people of French-Canadian or Cajun descent. PKU - PhenylketonuriaPKU is a recessive genetic disease in which the person does not have the ability to break down the amino acid phenylalanine. The level of phenylalanine in the persons blood builds up and interferes with the development of the nervous system. Children that are raised on a phenylalanine-restricted diet may develop normally but children that are not raised on a special diet will become severely mentally handicapped. The diet should be followed for life because high phenylalanine levels affect cognitive functioning. Genetic screening is the routine testing of individuals for specific genotypes. Newborns in U.S. hospitals are screened for PKU. PKU women must resume the diet several months before conception The incidence of PKU in the United States is 1 in 13,500 to 1 in 19,000. Sickle-Cell AnemiaSickle-cell anemia is an abnormality of hemoglobin, the molecule that carries oxygen in our blood. Hemoglobin is contained within red blood cells. When the oxygen concentration in the hemoglobin molecules becomes low, the molecules stick together forming long rods that distort the cell (picture below). The cells break down or clog blood vessels causing pain, poor circulation, jaundice, anemia, internal hemorrhaging, low resistance, and damage to internal organs. Death usually occurs before age 50.
Heterozygotes (carriers) are not affected with anemia and are resistant to malaria. Eight to ten percent of African Americans carry the allele (have sickle-cell trait). Hemochromatosis
Autosomal DominantSevere dominant diseases are rare because carriers die before they get a chance to reproduce and pass on the disease to their offspring. Heterozygotes (Aa) have the trait. Children with the trait have at least one parent that has the trait. Two parents with the trait can produce a child that does not have the trait. Both males and females are affected equally. Neurofibromatosis (NF)Neurofibramatosis is actually three separate genetic diseases that cause benign tumors to grow on nerves. People with this gene typically have 6 or more large tan spots on the skin which may increase in size, number and darkness. There may be learning disabilities and hyperactivity. The disease is usually mild but may be severe causing deformities and even death. The incidence is 1 in 3000 newborns. The gene is on chromosome 17. Huntingtons DiseaseThe brain cells of Huntington's victims slowly degenerate, producing jerking muscles, slurred speech, swallowing difficulty, loss of balance, mood swings, reasoning and memory loss, incapacitation, and eventually death (usually from pneumonia or heart failure). The onset of Huntingtons disease is typically 35 to 45 years. It is caused by a repeated DNA sequence (AGC). The normal allele has 11-34 copies; affected people have 42 - 120 copies. The severity and time of onset depends on the number of repeats. People who are most at risk inherit the gene from their father. This is an example of genomic imprinting. The gene is on chromosome 4. A diagnostic test is available. X-Linked RecessiveMore males than females have x-linked recessive traits. A son with the trait can have parents that do not have the trait. There is no father to son transmission of the gene. The trait can skip generations; grandfather to grandson transmission can occur.
If a female has the trait, her father has it, her mother is a carrier (or has it), and all her sons will have it.
Color Blindness3 different kinds 2 X-linked forms: 1 for green insensitivity (6% of all males), one for red insensitivity (2% of all males); 1 in 12 males have some form of colorblindness. HemophiliaPeople with hemophilia lack a clotting factor in their blood and as a result, their blood does not form clots normally. This results in excessive bleeding from even minor cuts. Internal hemorrhaging from bruises is common and leads to painful complications. The incidence is in 1,500 newborn males. Most (75%) have hemophilia A, a lack of clotting factor VIII. Hemophilia B- "Christmas Disease" is a defect in clotting factor IX. Transfusions of fresh whole blood or plasma or factor concentrates control bleeding but have previously caused AIDS infections. The human gene has been isolated and cloned using recombinant DNA techniques. This is leading to improved treatment. Royal Families of EuropeVictoria (granddaughter of George III) was a carrier and spread the gene to the royal families of Europe. Her granddaughter Alix- married Czar Nicholas II of Russia. The Czars son Alexis, heir to the throne, had hemophilia. The Czar's preoccupation with Alexis' health contributed to the revolution that overthrew the throne and eventually led to the communist government. Duchenne Muscular DystrophyThere are four different kinds of X-linked muscular dystrophy. They are multiple alleles at a single locus. Duchennes is the most common and most severe form of muscular dystrophy. 1 in 5,000 live male births (Duchennes) One in 4000 newborn males have some form of muscular dystrophy. One third of these are new mutations. Muscular deterioration begins between ages 3 to 5. Affected individuals are confined to a wheelchair by age12 and rarely survive past age 20. Death is usually due to breathing or heart problems. It is transmitted primarily by female carriers (males rarely reproduce) |